File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/3414fb68a290059e3386fe32ad6c33/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-la6sgs7b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:12,538 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:13,342 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:13,520 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:28,782 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:29,004 - cnv_pipe.batch.run_model - INFO - Processing cluster 958 with 176 probes
2026-06-02 18:37:29,382 - cnv_pipe.batch.run_model.cluster958 - INFO - Child process started for cluster 958 with 176 probes
2026-06-02 18:40:43,753 - cnv_pipe.batch.run_model.cluster958 - INFO - Child process finished cluster 958. Wrote cluster_958_samples.csv and cluster_958_params.csv
2026-06-02 18:40:43,757 - cnv_pipe.batch.run_model - INFO - Cluster 958 finished in 194.75 seconds. Status: SUCCESS