File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/1b89c8bf9c77193bc59e6f2e249669/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g94xju6_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:15,201 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:16,008 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:16,190 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:31,476 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:31,717 - cnv_pipe.batch.run_model - INFO - Processing cluster 703 with 178 probes
2026-06-02 18:38:32,139 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process started for cluster 703 with 178 probes
2026-06-02 18:41:54,563 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process finished cluster 703. Wrote cluster_703_samples.csv and cluster_703_params.csv
2026-06-02 18:41:54,566 - cnv_pipe.batch.run_model - INFO - Cluster 703 finished in 202.85 seconds. Status: SUCCESS