File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/cc47d570f5e3d454df1974fb14be72/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-448cjqz8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:39:53,056 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:39:53,850 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:39:54,020 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:40:09,349 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:40:09,438 - cnv_pipe.batch.run_model - INFO - Processing cluster 1266 with 195 probes
2026-06-02 18:40:09,966 - cnv_pipe.batch.run_model.cluster1266 - INFO - Child process started for cluster 1266 with 195 probes
2026-06-02 18:43:56,315 - cnv_pipe.batch.run_model.cluster1266 - INFO - Child process finished cluster 1266. Wrote cluster_1266_samples.csv and cluster_1266_params.csv
2026-06-02 18:43:56,317 - cnv_pipe.batch.run_model - INFO - Cluster 1266 finished in 226.88 seconds. Status: SUCCESS