File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/275d692aa2468a287a9e37cc432205/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5j9p_s7y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:47,407 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:48,204 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:48,397 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:03,772 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:03,851 - cnv_pipe.batch.run_model - INFO - Processing cluster 1133 with 185 probes
2026-06-02 18:38:04,227 - cnv_pipe.batch.run_model.cluster1133 - INFO - Child process started for cluster 1133 with 185 probes
2026-06-02 18:41:21,990 - cnv_pipe.batch.run_model.cluster1133 - INFO - Child process finished cluster 1133. Wrote cluster_1133_samples.csv and cluster_1133_params.csv
2026-06-02 18:41:21,993 - cnv_pipe.batch.run_model - INFO - Cluster 1133 finished in 198.14 seconds. Status: SUCCESS