File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/c27a7c88f19a362eb6ef99edb14392/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zqag2xpf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:18,888 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:19,673 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:19,848 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:34,688 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:34,769 - cnv_pipe.batch.run_model - INFO - Processing cluster 985 with 145 probes
2026-06-02 18:37:35,274 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process started for cluster 985 with 145 probes
2026-06-02 18:40:15,768 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process finished cluster 985. Wrote cluster_985_samples.csv and cluster_985_params.csv
2026-06-02 18:40:15,771 - cnv_pipe.batch.run_model - INFO - Cluster 985 finished in 161.00 seconds. Status: SUCCESS