File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/5f957897ad4dc3e77194f993b4afdb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mci1if8l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:36:29,157 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:36:30,026 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:36:30,210 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:36:45,552 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:36:45,777 - cnv_pipe.batch.run_model - INFO - Processing cluster 733 with 192 probes
2026-06-02 18:36:46,161 - cnv_pipe.batch.run_model.cluster733 - INFO - Child process started for cluster 733 with 192 probes
2026-06-02 18:40:14,516 - cnv_pipe.batch.run_model.cluster733 - INFO - Child process finished cluster 733. Wrote cluster_733_samples.csv and cluster_733_params.csv
2026-06-02 18:40:14,519 - cnv_pipe.batch.run_model - INFO - Cluster 733 finished in 208.74 seconds. Status: SUCCESS