File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/333a3acff6db0fde365785af2251b3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-stvtkuu7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:37:40,679 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:37:41,510 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:37:41,693 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:37:56,871 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:37:56,954 - cnv_pipe.batch.run_model - INFO - Processing cluster 1095 with 195 probes
2026-06-02 18:37:57,337 - cnv_pipe.batch.run_model.cluster1095 - INFO - Child process started for cluster 1095 with 195 probes
2026-06-02 18:41:23,293 - cnv_pipe.batch.run_model.cluster1095 - INFO - Child process finished cluster 1095. Wrote cluster_1095_samples.csv and cluster_1095_params.csv
2026-06-02 18:41:23,296 - cnv_pipe.batch.run_model - INFO - Cluster 1095 finished in 206.34 seconds. Status: SUCCESS