File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/d415edbf4e37f857a5def296c5a1dd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9ziua2ds because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:38:12,883 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:38:13,666 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:38:13,839 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:38:28,656 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:38:28,879 - cnv_pipe.batch.run_model - INFO - Processing cluster 1274 with 187 probes
2026-06-02 18:38:29,253 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process started for cluster 1274 with 187 probes
2026-06-02 18:41:50,632 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process finished cluster 1274. Wrote cluster_1274_samples.csv and cluster_1274_params.csv
2026-06-02 18:41:50,635 - cnv_pipe.batch.run_model - INFO - Cluster 1274 finished in 201.76 seconds. Status: SUCCESS