File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/c547d4efaab3c6350698ac86f5d29e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uv_jilzz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-02 18:36:28,542 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-02 18:36:29,336 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-02 18:36:29,511 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-02 18:36:44,178 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-02 18:36:44,403 - cnv_pipe.batch.run_model - INFO - Processing cluster 737 with 175 probes
2026-06-02 18:36:44,782 - cnv_pipe.batch.run_model.cluster737 - INFO - Child process started for cluster 737 with 175 probes
2026-06-02 18:39:59,857 - cnv_pipe.batch.run_model.cluster737 - INFO - Child process finished cluster 737. Wrote cluster_737_samples.csv and cluster_737_params.csv
2026-06-02 18:39:59,860 - cnv_pipe.batch.run_model - INFO - Cluster 737 finished in 195.46 seconds. Status: SUCCESS