mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ndsnwih2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:28,693 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:29,586 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:29,759 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:45,704 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:45,983 - cnv_pipe.batch.run_model - INFO - Processing cluster 1247 with 164 probes
2026-06-03 04:41:46,517 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process started for cluster 1247 with 164 probes
2026-06-03 04:44:43,478 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process finished cluster 1247. Wrote cluster_1247_samples.csv and cluster_1247_params.csv
2026-06-03 04:44:43,480 - cnv_pipe.batch.run_model - INFO - Cluster 1247 finished in 177.50 seconds. Status: SUCCESS