mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-up4uhugi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:19,213 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:20,010 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:20,190 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:35,576 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:35,770 - cnv_pipe.batch.run_model - INFO - Processing cluster 846 with 197 probes
2026-06-03 04:40:36,141 - cnv_pipe.batch.run_model.cluster846 - INFO - Child process started for cluster 846 with 197 probes
2026-06-03 04:44:11,552 - cnv_pipe.batch.run_model.cluster846 - INFO - Child process finished cluster 846. Wrote cluster_846_samples.csv and cluster_846_params.csv
2026-06-03 04:44:11,555 - cnv_pipe.batch.run_model - INFO - Cluster 846 finished in 215.78 seconds. Status: SUCCESS