File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/2840c927f2008de55fe8844666c9e7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2mof0jph because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:12,808 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:13,825 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:14,012 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:30,112 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:30,205 - cnv_pipe.batch.run_model - INFO - Processing cluster 1161 with 185 probes
2026-06-03 04:41:30,883 - cnv_pipe.batch.run_model.cluster1161 - INFO - Child process started for cluster 1161 with 185 probes
2026-06-03 04:44:34,579 - cnv_pipe.batch.run_model.cluster1161 - INFO - Child process finished cluster 1161. Wrote cluster_1161_samples.csv and cluster_1161_params.csv
2026-06-03 04:44:34,582 - cnv_pipe.batch.run_model - INFO - Cluster 1161 finished in 184.38 seconds. Status: SUCCESS