File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/38eccdcf7356d69be30a8d18fd1bcf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-utdlkbx8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:11,543 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:12,618 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:12,822 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:31,658 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:31,768 - cnv_pipe.batch.run_model - INFO - Processing cluster 1152 with 175 probes
2026-06-03 04:41:32,383 - cnv_pipe.batch.run_model.cluster1152 - INFO - Child process started for cluster 1152 with 175 probes
2026-06-03 04:44:58,958 - cnv_pipe.batch.run_model.cluster1152 - INFO - Child process finished cluster 1152. Wrote cluster_1152_samples.csv and cluster_1152_params.csv
2026-06-03 04:44:58,961 - cnv_pipe.batch.run_model - INFO - Cluster 1152 finished in 207.19 seconds. Status: SUCCESS