mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wr0fyqx5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:42:38,064 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:42:38,869 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:42:39,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:54,890 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:55,140 - cnv_pipe.batch.run_model - INFO - Processing cluster 1266 with 195 probes
2026-06-03 04:42:55,562 - cnv_pipe.batch.run_model.cluster1266 - INFO - Child process started for cluster 1266 with 195 probes
2026-06-03 04:46:36,475 - cnv_pipe.batch.run_model.cluster1266 - INFO - Child process finished cluster 1266. Wrote cluster_1266_samples.csv and cluster_1266_params.csv
2026-06-03 04:46:36,477 - cnv_pipe.batch.run_model - INFO - Cluster 1266 finished in 221.34 seconds. Status: SUCCESS