mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s1yf1bol because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:52,212 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:53,024 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:53,200 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:07,907 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:08,148 - cnv_pipe.batch.run_model - INFO - Processing cluster 941 with 188 probes
2026-06-03 04:41:08,567 - cnv_pipe.batch.run_model.cluster941 - INFO - Child process started for cluster 941 with 188 probes
2026-06-03 04:44:30,191 - cnv_pipe.batch.run_model.cluster941 - INFO - Child process finished cluster 941. Wrote cluster_941_samples.csv and cluster_941_params.csv
2026-06-03 04:44:30,194 - cnv_pipe.batch.run_model - INFO - Cluster 941 finished in 202.05 seconds. Status: SUCCESS