File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/11fd196aba3c18dc4a9d4199783dc7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8qbltbla because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:58,310 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:59,108 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:59,283 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:14,625 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:14,856 - cnv_pipe.batch.run_model - INFO - Processing cluster 1121 with 183 probes
2026-06-03 04:42:15,236 - cnv_pipe.batch.run_model.cluster1121 - INFO - Child process started for cluster 1121 with 183 probes
2026-06-03 04:45:39,223 - cnv_pipe.batch.run_model.cluster1121 - INFO - Child process finished cluster 1121. Wrote cluster_1121_samples.csv and cluster_1121_params.csv
2026-06-03 04:45:39,226 - cnv_pipe.batch.run_model - INFO - Cluster 1121 finished in 204.37 seconds. Status: SUCCESS