mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9daks9yy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:37:31,406 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:37:32,211 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:37:32,381 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:37:46,523 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:37:46,596 - cnv_pipe.batch.run_model - INFO - Processing cluster 0 with 137 probes
2026-06-03 04:37:47,107 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process started for cluster 0 with 137 probes
2026-06-03 04:40:13,279 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process finished cluster 0. Wrote cluster_0_samples.csv and cluster_0_params.csv
2026-06-03 04:40:13,281 - cnv_pipe.batch.run_model - INFO - Cluster 0 finished in 146.68 seconds. Status: SUCCESS