File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/927421b3f1bf51c0eb6ceea32ceea7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-awg6k_im because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:39,077 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:40,104 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:40,300 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:57,195 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:57,460 - cnv_pipe.batch.run_model - INFO - Processing cluster 1295 with 187 probes
2026-06-03 04:41:57,907 - cnv_pipe.batch.run_model.cluster1295 - INFO - Child process started for cluster 1295 with 187 probes
2026-06-03 04:45:19,941 - cnv_pipe.batch.run_model.cluster1295 - INFO - Child process finished cluster 1295. Wrote cluster_1295_samples.csv and cluster_1295_params.csv
2026-06-03 04:45:19,944 - cnv_pipe.batch.run_model - INFO - Cluster 1295 finished in 202.48 seconds. Status: SUCCESS