mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qdqn0iws because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:42:15,834 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:42:16,653 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:42:16,845 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:32,394 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:32,644 - cnv_pipe.batch.run_model - INFO - Processing cluster 1018 with 170 probes
2026-06-03 04:42:33,020 - cnv_pipe.batch.run_model.cluster1018 - INFO - Child process started for cluster 1018 with 170 probes
2026-06-03 04:45:45,564 - cnv_pipe.batch.run_model.cluster1018 - INFO - Child process finished cluster 1018. Wrote cluster_1018_samples.csv and cluster_1018_params.csv
2026-06-03 04:45:45,568 - cnv_pipe.batch.run_model - INFO - Cluster 1018 finished in 192.92 seconds. Status: SUCCESS