mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ax8foecj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:22,843 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:23,927 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:24,120 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:42,020 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:42,317 - cnv_pipe.batch.run_model - INFO - Processing cluster 893 with 200 probes
2026-06-03 04:40:42,815 - cnv_pipe.batch.run_model.cluster893 - INFO - Child process started for cluster 893 with 200 probes
2026-06-03 04:44:15,568 - cnv_pipe.batch.run_model.cluster893 - INFO - Child process finished cluster 893. Wrote cluster_893_samples.csv and cluster_893_params.csv
2026-06-03 04:44:15,571 - cnv_pipe.batch.run_model - INFO - Cluster 893 finished in 213.25 seconds. Status: SUCCESS