mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hbquyjgw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:45,116 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:45,930 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:46,101 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:01,423 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:01,664 - cnv_pipe.batch.run_model - INFO - Processing cluster 995 with 89 probes
2026-06-03 04:42:02,068 - cnv_pipe.batch.run_model.cluster995 - INFO - Child process started for cluster 995 with 89 probes
2026-06-03 04:43:45,265 - cnv_pipe.batch.run_model.cluster995 - INFO - Child process finished cluster 995. Wrote cluster_995_samples.csv and cluster_995_params.csv
2026-06-03 04:43:45,266 - cnv_pipe.batch.run_model - INFO - Cluster 995 finished in 103.60 seconds. Status: SUCCESS