mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-27502d67 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:55,400 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:56,185 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:56,364 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:11,813 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:12,016 - cnv_pipe.batch.run_model - INFO - Processing cluster 947 with 187 probes
2026-06-03 04:41:12,391 - cnv_pipe.batch.run_model.cluster947 - INFO - Child process started for cluster 947 with 187 probes
2026-06-03 04:44:33,889 - cnv_pipe.batch.run_model.cluster947 - INFO - Child process finished cluster 947. Wrote cluster_947_samples.csv and cluster_947_params.csv
2026-06-03 04:44:33,892 - cnv_pipe.batch.run_model - INFO - Cluster 947 finished in 201.88 seconds. Status: SUCCESS