File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/3efea8fdeff327a9f66866b0a1c2ac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8c0r807w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:47,890 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:48,680 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:48,853 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:04,738 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:04,966 - cnv_pipe.batch.run_model - INFO - Processing cluster 1181 with 169 probes
2026-06-03 04:42:05,344 - cnv_pipe.batch.run_model.cluster1181 - INFO - Child process started for cluster 1181 with 169 probes
2026-06-03 04:45:17,184 - cnv_pipe.batch.run_model.cluster1181 - INFO - Child process finished cluster 1181. Wrote cluster_1181_samples.csv and cluster_1181_params.csv
2026-06-03 04:45:17,187 - cnv_pipe.batch.run_model - INFO - Cluster 1181 finished in 192.22 seconds. Status: SUCCESS