File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/6484f61342f4c173a3f22b2f3e65cf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i0jevf8p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:32,725 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:34,054 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:34,357 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:58,378 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:58,505 - cnv_pipe.batch.run_model - INFO - Processing cluster 801 with 177 probes
2026-06-03 04:41:59,136 - cnv_pipe.batch.run_model.cluster801 - INFO - Child process started for cluster 801 with 177 probes
2026-06-03 04:46:23,106 - cnv_pipe.batch.run_model.cluster801 - INFO - Child process finished cluster 801. Wrote cluster_801_samples.csv and cluster_801_params.csv
2026-06-03 04:46:23,107 - cnv_pipe.batch.run_model - INFO - Cluster 801 finished in 264.60 seconds. Status: SUCCESS