mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0p5mvhw9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:44,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:45,084 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:45,262 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:00,480 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:00,686 - cnv_pipe.batch.run_model - INFO - Processing cluster 938 with 152 probes
2026-06-03 04:41:01,069 - cnv_pipe.batch.run_model.cluster938 - INFO - Child process started for cluster 938 with 152 probes
2026-06-03 04:43:49,612 - cnv_pipe.batch.run_model.cluster938 - INFO - Child process finished cluster 938. Wrote cluster_938_samples.csv and cluster_938_params.csv
2026-06-03 04:43:49,615 - cnv_pipe.batch.run_model - INFO - Cluster 938 finished in 168.93 seconds. Status: SUCCESS