File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/58d7500d0ced43ed9c196ca9c7a67e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eh4yuk5s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:50,827 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:51,629 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:51,799 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:07,465 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:07,679 - cnv_pipe.batch.run_model - INFO - Processing cluster 1322 with 185 probes
2026-06-03 04:42:08,051 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process started for cluster 1322 with 185 probes
2026-06-03 04:45:35,205 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process finished cluster 1322. Wrote cluster_1322_samples.csv and cluster_1322_params.csv
2026-06-03 04:45:35,208 - cnv_pipe.batch.run_model - INFO - Cluster 1322 finished in 207.53 seconds. Status: SUCCESS