mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gagxjdpl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:33,676 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:34,468 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:34,646 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:50,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:50,473 - cnv_pipe.batch.run_model - INFO - Processing cluster 885 with 186 probes
2026-06-03 04:41:50,850 - cnv_pipe.batch.run_model.cluster885 - INFO - Child process started for cluster 885 with 186 probes
2026-06-03 04:45:22,939 - cnv_pipe.batch.run_model.cluster885 - INFO - Child process finished cluster 885. Wrote cluster_885_samples.csv and cluster_885_params.csv
2026-06-03 04:45:22,941 - cnv_pipe.batch.run_model - INFO - Cluster 885 finished in 212.47 seconds. Status: SUCCESS