mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-miaq6r2w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:49,579 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:50,369 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:50,540 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:06,222 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:06,432 - cnv_pipe.batch.run_model - INFO - Processing cluster 1280 with 176 probes
2026-06-03 04:42:06,809 - cnv_pipe.batch.run_model.cluster1280 - INFO - Child process started for cluster 1280 with 176 probes
2026-06-03 04:45:29,014 - cnv_pipe.batch.run_model.cluster1280 - INFO - Child process finished cluster 1280. Wrote cluster_1280_samples.csv and cluster_1280_params.csv
2026-06-03 04:45:29,017 - cnv_pipe.batch.run_model - INFO - Cluster 1280 finished in 202.58 seconds. Status: SUCCESS