mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p28dlw0r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:37:54,655 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:37:55,453 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:37:55,624 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:38:10,640 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:38:10,870 - cnv_pipe.batch.run_model - INFO - Processing cluster 117 with 195 probes
2026-06-03 04:38:11,258 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process started for cluster 117 with 195 probes
2026-06-03 04:41:26,888 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process finished cluster 117. Wrote cluster_117_samples.csv and cluster_117_params.csv
2026-06-03 04:41:26,891 - cnv_pipe.batch.run_model - INFO - Cluster 117 finished in 196.02 seconds. Status: SUCCESS