mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3oqncuep because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:34,457 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:35,367 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:35,541 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:50,965 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:51,177 - cnv_pipe.batch.run_model - INFO - Processing cluster 959 with 200 probes
2026-06-03 04:40:51,594 - cnv_pipe.batch.run_model.cluster959 - INFO - Child process started for cluster 959 with 200 probes
2026-06-03 04:44:01,378 - cnv_pipe.batch.run_model.cluster959 - INFO - Child process finished cluster 959. Wrote cluster_959_samples.csv and cluster_959_params.csv
2026-06-03 04:44:01,381 - cnv_pipe.batch.run_model - INFO - Cluster 959 finished in 190.20 seconds. Status: SUCCESS