mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kup5w43h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:55,001 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:56,550 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:56,843 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:19,563 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:19,741 - cnv_pipe.batch.run_model - INFO - Processing cluster 1039 with 97 probes
2026-06-03 04:41:20,607 - cnv_pipe.batch.run_model.cluster1039 - INFO - Child process started for cluster 1039 with 97 probes
2026-06-03 04:43:47,201 - cnv_pipe.batch.run_model.cluster1039 - INFO - Child process finished cluster 1039. Wrote cluster_1039_samples.csv and cluster_1039_params.csv
2026-06-03 04:43:47,203 - cnv_pipe.batch.run_model - INFO - Cluster 1039 finished in 147.46 seconds. Status: SUCCESS