mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-80f82bua because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:37:48,521 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:37:49,303 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:37:49,472 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:38:03,552 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:38:03,749 - cnv_pipe.batch.run_model - INFO - Processing cluster 87 with 186 probes
2026-06-03 04:38:04,137 - cnv_pipe.batch.run_model.cluster87 - INFO - Child process started for cluster 87 with 186 probes
2026-06-03 04:41:04,542 - cnv_pipe.batch.run_model.cluster87 - INFO - Child process finished cluster 87. Wrote cluster_87_samples.csv and cluster_87_params.csv
2026-06-03 04:41:04,544 - cnv_pipe.batch.run_model - INFO - Cluster 87 finished in 180.79 seconds. Status: SUCCESS