mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4kcrjrtf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:50,903 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:51,694 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:51,860 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:06,259 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:06,491 - cnv_pipe.batch.run_model - INFO - Processing cluster 745 with 177 probes
2026-06-03 04:41:06,871 - cnv_pipe.batch.run_model.cluster745 - INFO - Child process started for cluster 745 with 177 probes
2026-06-03 04:44:26,125 - cnv_pipe.batch.run_model.cluster745 - INFO - Child process finished cluster 745. Wrote cluster_745_samples.csv and cluster_745_params.csv
2026-06-03 04:44:26,127 - cnv_pipe.batch.run_model - INFO - Cluster 745 finished in 199.64 seconds. Status: SUCCESS