mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rnxy8bnv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:47,539 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:48,818 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:49,096 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:42:11,976 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:42:12,263 - cnv_pipe.batch.run_model - INFO - Processing cluster 1054 with 124 probes
2026-06-03 04:42:12,882 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process started for cluster 1054 with 124 probes
2026-06-03 04:45:34,587 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process finished cluster 1054. Wrote cluster_1054_samples.csv and cluster_1054_params.csv
2026-06-03 04:45:34,590 - cnv_pipe.batch.run_model - INFO - Cluster 1054 finished in 202.33 seconds. Status: SUCCESS