mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h7swau1v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:49,153 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:49,960 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:50,127 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:05,829 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:05,910 - cnv_pipe.batch.run_model - INFO - Processing cluster 943 with 195 probes
2026-06-03 04:41:06,319 - cnv_pipe.batch.run_model.cluster943 - INFO - Child process started for cluster 943 with 195 probes
2026-06-03 04:44:41,030 - cnv_pipe.batch.run_model.cluster943 - INFO - Child process finished cluster 943. Wrote cluster_943_samples.csv and cluster_943_params.csv
2026-06-03 04:44:41,033 - cnv_pipe.batch.run_model - INFO - Cluster 943 finished in 215.12 seconds. Status: SUCCESS