mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-am5cc1ez because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:41:06,433 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:41:07,326 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:41:07,502 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:41:22,620 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:41:22,847 - cnv_pipe.batch.run_model - INFO - Processing cluster 694 with 139 probes
2026-06-03 04:41:23,255 - cnv_pipe.batch.run_model.cluster694 - INFO - Child process started for cluster 694 with 139 probes
2026-06-03 04:44:00,271 - cnv_pipe.batch.run_model.cluster694 - INFO - Child process finished cluster 694. Wrote cluster_694_samples.csv and cluster_694_params.csv
2026-06-03 04:44:00,273 - cnv_pipe.batch.run_model - INFO - Cluster 694 finished in 157.43 seconds. Status: SUCCESS