mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oci88gbc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:33,535 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:34,318 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:34,482 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:49:56,061 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:49:56,275 - cnv_pipe.batch.run_model - INFO - Processing cluster 540 with 185 probes
2026-06-03 04:49:56,648 - cnv_pipe.batch.run_model.cluster540 - INFO - Child process started for cluster 540 with 185 probes
2026-06-03 04:53:19,182 - cnv_pipe.batch.run_model.cluster540 - INFO - Child process finished cluster 540. Wrote cluster_540_samples.csv and cluster_540_params.csv
2026-06-03 04:53:19,185 - cnv_pipe.batch.run_model - INFO - Cluster 540 finished in 202.91 seconds. Status: SUCCESS