mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wet6vxli because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:21,096 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:22,063 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:22,253 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:46,075 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:46,294 - cnv_pipe.batch.run_model - INFO - Processing cluster 775 with 199 probes
2026-06-03 04:50:46,667 - cnv_pipe.batch.run_model.cluster775 - INFO - Child process started for cluster 775 with 199 probes
2026-06-03 04:54:19,178 - cnv_pipe.batch.run_model.cluster775 - INFO - Child process finished cluster 775. Wrote cluster_775_samples.csv and cluster_775_params.csv
2026-06-03 04:54:19,181 - cnv_pipe.batch.run_model - INFO - Cluster 775 finished in 212.89 seconds. Status: SUCCESS