mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zqlae1xi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:41,056 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:42,068 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:42,261 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:07,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:07,572 - cnv_pipe.batch.run_model - INFO - Processing cluster 1208 with 178 probes
2026-06-03 04:52:07,985 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process started for cluster 1208 with 178 probes
2026-06-03 04:55:31,359 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process finished cluster 1208. Wrote cluster_1208_samples.csv and cluster_1208_params.csv
2026-06-03 04:55:31,362 - cnv_pipe.batch.run_model - INFO - Cluster 1208 finished in 203.79 seconds. Status: SUCCESS