File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/c4a10ee4e44b49a329e5dec2fca1f1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lho0_7xl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:28,204 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:29,125 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:29,301 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:52,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:53,257 - cnv_pipe.batch.run_model - INFO - Processing cluster 1142 with 194 probes
2026-06-03 04:51:53,704 - cnv_pipe.batch.run_model.cluster1142 - INFO - Child process started for cluster 1142 with 194 probes
2026-06-03 04:55:24,535 - cnv_pipe.batch.run_model.cluster1142 - INFO - Child process finished cluster 1142. Wrote cluster_1142_samples.csv and cluster_1142_params.csv
2026-06-03 04:55:24,538 - cnv_pipe.batch.run_model - INFO - Cluster 1142 finished in 211.28 seconds. Status: SUCCESS