mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vhhbfs4o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:44,703 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:45,816 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:46,035 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:13,723 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:13,975 - cnv_pipe.batch.run_model - INFO - Processing cluster 897 with 200 probes
2026-06-03 04:51:14,524 - cnv_pipe.batch.run_model.cluster897 - INFO - Child process started for cluster 897 with 200 probes
2026-06-03 04:55:43,068 - cnv_pipe.batch.run_model.cluster897 - INFO - Child process finished cluster 897. Wrote cluster_897_samples.csv and cluster_897_params.csv
2026-06-03 04:55:43,070 - cnv_pipe.batch.run_model - INFO - Cluster 897 finished in 269.10 seconds. Status: SUCCESS