mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f0_gjtnz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:03,378 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:04,681 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:04,962 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:38,870 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:39,140 - cnv_pipe.batch.run_model - INFO - Processing cluster 988 with 172 probes
2026-06-03 04:51:39,788 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process started for cluster 988 with 172 probes
2026-06-03 04:56:25,600 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process finished cluster 988. Wrote cluster_988_samples.csv and cluster_988_params.csv
2026-06-03 04:56:25,604 - cnv_pipe.batch.run_model - INFO - Cluster 988 finished in 286.46 seconds. Status: SUCCESS