File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/2e5c81525ab155db85e266d28a6f92/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ts1ds57a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:18,949 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:19,779 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:19,950 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:43,786 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:43,876 - cnv_pipe.batch.run_model - INFO - Processing cluster 771 with 200 probes
2026-06-03 04:50:44,309 - cnv_pipe.batch.run_model.cluster771 - INFO - Child process started for cluster 771 with 200 probes
2026-06-03 04:54:18,746 - cnv_pipe.batch.run_model.cluster771 - INFO - Child process finished cluster 771. Wrote cluster_771_samples.csv and cluster_771_params.csv
2026-06-03 04:54:18,749 - cnv_pipe.batch.run_model - INFO - Cluster 771 finished in 214.87 seconds. Status: SUCCESS