mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-an71asu3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:57,008 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:57,834 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:58,014 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:20,302 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:20,385 - cnv_pipe.batch.run_model - INFO - Processing cluster 978 with 196 probes
2026-06-03 04:51:20,753 - cnv_pipe.batch.run_model.cluster978 - INFO - Child process started for cluster 978 with 196 probes
2026-06-03 04:55:06,806 - cnv_pipe.batch.run_model.cluster978 - INFO - Child process finished cluster 978. Wrote cluster_978_samples.csv and cluster_978_params.csv
2026-06-03 04:55:06,809 - cnv_pipe.batch.run_model - INFO - Cluster 978 finished in 226.42 seconds. Status: SUCCESS