File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/b1ed2715f26d6b4e87f461b81e99dc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ywiff3zq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:48:08,113 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:48:08,902 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:48:09,071 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:48:30,973 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:48:31,219 - cnv_pipe.batch.run_model - INFO - Processing cluster 120 with 188 probes
2026-06-03 04:48:31,595 - cnv_pipe.batch.run_model.cluster120 - INFO - Child process started for cluster 120 with 188 probes
2026-06-03 04:52:13,639 - cnv_pipe.batch.run_model.cluster120 - INFO - Child process finished cluster 120. Wrote cluster_120_samples.csv and cluster_120_params.csv
2026-06-03 04:52:13,641 - cnv_pipe.batch.run_model - INFO - Cluster 120 finished in 222.42 seconds. Status: SUCCESS