File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/13faf5eb1c745a559592726666038b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6bbltajz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:40,461 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:41,373 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:41,563 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:05,098 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:05,326 - cnv_pipe.batch.run_model - INFO - Processing cluster 1210 with 50 probes
2026-06-03 04:52:05,732 - cnv_pipe.batch.run_model.cluster1210 - INFO - Child process started for cluster 1210 with 50 probes
2026-06-03 04:53:13,506 - cnv_pipe.batch.run_model.cluster1210 - INFO - Child process finished cluster 1210. Wrote cluster_1210_samples.csv and cluster_1210_params.csv
2026-06-03 04:53:13,507 - cnv_pipe.batch.run_model - INFO - Cluster 1210 finished in 68.18 seconds. Status: SUCCESS