mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s5wn_4re because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:44,140 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:45,095 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:45,285 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:08,849 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:08,934 - cnv_pipe.batch.run_model - INFO - Processing cluster 1228 with 177 probes
2026-06-03 04:52:09,429 - cnv_pipe.batch.run_model.cluster1228 - INFO - Child process started for cluster 1228 with 177 probes
2026-06-03 04:55:26,369 - cnv_pipe.batch.run_model.cluster1228 - INFO - Child process finished cluster 1228. Wrote cluster_1228_samples.csv and cluster_1228_params.csv
2026-06-03 04:55:26,372 - cnv_pipe.batch.run_model - INFO - Cluster 1228 finished in 197.44 seconds. Status: SUCCESS