mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g1qxvldt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:43,430 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:44,383 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:44,567 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:09,170 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:09,413 - cnv_pipe.batch.run_model - INFO - Processing cluster 1229 with 174 probes
2026-06-03 04:52:09,885 - cnv_pipe.batch.run_model.cluster1229 - INFO - Child process started for cluster 1229 with 174 probes
2026-06-03 04:55:34,328 - cnv_pipe.batch.run_model.cluster1229 - INFO - Child process finished cluster 1229. Wrote cluster_1229_samples.csv and cluster_1229_params.csv
2026-06-03 04:55:34,331 - cnv_pipe.batch.run_model - INFO - Cluster 1229 finished in 204.92 seconds. Status: SUCCESS