mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xvtj_et4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:50,349 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:51,232 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:51,410 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:15,242 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:15,470 - cnv_pipe.batch.run_model - INFO - Processing cluster 946 with 185 probes
2026-06-03 04:51:15,910 - cnv_pipe.batch.run_model.cluster946 - INFO - Child process started for cluster 946 with 185 probes
2026-06-03 04:54:48,535 - cnv_pipe.batch.run_model.cluster946 - INFO - Child process finished cluster 946. Wrote cluster_946_samples.csv and cluster_946_params.csv
2026-06-03 04:54:48,538 - cnv_pipe.batch.run_model - INFO - Cluster 946 finished in 213.07 seconds. Status: SUCCESS