mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9lps73c5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:05,577 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:06,391 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:06,563 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:28,668 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:28,759 - cnv_pipe.batch.run_model - INFO - Processing cluster 1019 with 112 probes
2026-06-03 04:51:29,174 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process started for cluster 1019 with 112 probes
2026-06-03 04:53:49,430 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process finished cluster 1019. Wrote cluster_1019_samples.csv and cluster_1019_params.csv
2026-06-03 04:53:49,432 - cnv_pipe.batch.run_model - INFO - Cluster 1019 finished in 140.67 seconds. Status: SUCCESS